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1

Decaying signals: will understanding bacterial–plant communications lead to control of soft rot?

Amy O Charkowski

Journal:

Current Opinion in Biotechnology

Year:

2009

Language:

english

File:

PDF, 530 KB

english, 2009

2

Pectobacterium carotovorum Elicits Plant Cell Death with DspE/F but the P. carotovorum DspE Does Not Suppress Callose or Induce Expression of Plant Genes Early in Plant–Microbe Interactions

Kim, Hye-Sook, Thammarat, Phanit, Lommel, Steven A., Hogan, Clifford S., Charkowski, Amy O.

Journal:

Molecular Plant-Microbe Interactions

Year:

2011

Language:

english

File:

PDF, 782 KB

english, 2011

3

Reinventing Potato as a Diploid Inbred Line–Based Crop

Jansky, Shelley H., Charkowski, Amy O., Douches, David S., Gusmini, Gabe, Richael, Craig, Bethke, Paul C., Spooner, David M., Novy, Richard G., De Jong, Hielke, De Jong, Walter S., Bamberg, John B., T

Journal:

Year:

2016

Language:

english

File:

PDF, 611 KB

english, 2016

4

Straw mulch increases potato yield and suppresses weeds in an organic production system

Genger, Ruth K., Rouse, Douglas I., Charkowski, Amy O.

Journal:

Biological Agriculture & Horticulture

Year:

2017

Language:

english

File:

PDF, 1.76 MB

english, 2017

5

Ecdysteroid hormones and metabolites of the stone crab,Menippe mercenaria

Wang, Wenan L., Spaziani, Eugene, Huang, Zhi-Heng, Charkowski, Dennis M., Li, Yalan, Liu, X. Michael

Journal:

Journal of Experimental Zoology

Year:

2000

Language:

english

File:

PDF, 223 KB

english, 2000

6

Multiplex detection ofPotato virus S, Potato virus X, andPotato virus Yby non-radioactive nucleic acid spot hybridization in potato tissue culture plantlets

Katarzyna L. Janczur, Mark K. Nakhla, Amy O. Charkowski

Journal:

American Journal of Potato Research

Year:

2006

Language:

english

File:

PDF, 940 KB

english, 2006

7

Influence of Compaction and Subsoil Tillage on Soil Conditions and Pink Eye

Michael E. Copas, Alvin J. Bussan, Michael J. Drilias, Amy Charkowski

Journal:

American Journal of Potato Research

Year:

2008

File:

PDF, 304 KB

2008

8

CHEF PROCEDURES: A RAPID HIGH-TEMPERATURE METHOD FOR SAMPLE PREPARATION, A HIGH VOLTAGE HEPES BUFFER SYSTEM AND THE USE OF NUSIEVE® AGAROSE

THOMAS G. KINSCHERF, MEE-NGAN YAP, AMY O. CHARKOWSKI, DAVID K. WILLIS

Journal:

Journal of Rapid Methods & Automation in Microbiology

Year:

2009

Language:

english

File:

PDF, 112 KB

english, 2009

9

The Role of Secretion Systems and Small Molecules in Soft-Rot Enterobacteriaceae Pathogenicity

Charkowski, Amy, Blanco, Carlos, Condemine, Guy, Expert, Dominique, Franza, Thierry, Hayes, Christopher, Hugouvieux-Cotte-Pattat, Nicole, Solanilla, Emilia López, Low, David, Moleleki, Lucy, Pirhonen,

Journal:

Annual Review of Phytopathology

Year:

2012

Language:

english

File:

PDF, 1.53 MB

english, 2012

10

Malignant pericardial effusion and cardiac tamponade as a late complication of endometrial carcinoma

Jacob Kogan, Boris Golzman, Svetlana Turkot, David Ben-Dor, Tatiana Charkowsky, Shmuel Oren

Journal:

European Journal of Internal Medicine

Year:

2004

Language:

english

File:

PDF, 121 KB

english, 2004

11

Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation

Courtney E. Jahn, Amy O. Charkowski, David K. Willis

Journal:

Journal of Microbiological Methods

Year:

2008

Language:

english

File:

PDF, 308 KB

english, 2008

12

Phylogeny and Virulence of Naturally Occurring Type III Secretion System-Deficient Pectobacterium Strains

Kim, H.-S., Ma, B., Perna, N. T., Charkowski, A. O.

Journal:

Applied and Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 1.21 MB

english, 2009

13

Separation of phenytoin and its metabolites by high-performance liquid chromatography

Samson A. Chow, Dennis M. Charkowski, Lawrence J. Fischer

Journal:

Year:

1980

Language:

english

File:

PDF, 314 KB

english, 1980

14

Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria

Babujee, Lavanya, Apodaca, Jennifer, Balakrishnan, Venkatesh, Liss, Paul, Kiley, Patricia J, Charkowski, Amy O, Glasner, Jeremy D, Perna, Nicole T

Journal:

Year:

2012

Language:

english

File:

PDF, 600 KB

english, 2012

15

The Role of Cellulose and O-Antigen Capsule in the Colonization of Plants by Salmonella enterica

Barak, Jeri D., Jahn, Courtney E., Gibson, Deanna L., Charkowski, Amy O.

Journal:

Molecular Plant-Microbe Interactions

Year:

2007

Language:

english

File:

PDF, 492 KB

english, 2007

16

Host Range and Molecular Phylogenies of the Soft Rot Enterobacterial Genera Pectobacterium and Dickeya

Ma, Bing, Hibbing, Michael E., Kim, Hye-Sook, Reedy, Ralph M., Yedidia, Iris, Breuer, Jane, Breuer, Jeffrey, Glasner, Jeremy D., Perna, Nicole T., Kelman, Arthur, Charkowski, Amy O.

Journal:

Year:

2007

Language:

english

File:

PDF, 625 KB

english, 2007

17

Optimization of a Chemiluminescent Dot-Blot Immunoassay for Detection of Potato Viruses

Fulladolsa Palma, Ana C., Kota, Rajitha, Charkowski, Amy O.

Journal:

American Journal of Potato Research

Year:

2013

Language:

english

File:

PDF, 361 KB

english, 2013

18

Integrated Control of Potato Pathogens Through Seed Potato Certification and Provision of Clean Seed Potatoes

Frost, Kenneth E., Groves, Russell L., Charkowski, Amy O.

Journal:

Year:

2013

Language:

english

File:

PDF, 707 KB

english, 2013

19

A Draft Genome Sequence Reveals theHelminthosporium solaniArsenal for Cell Wall Degradation

Mattupalli, Chakradhar, Glasner, Jeremy D., Charkowski, Amy O.

Journal:

American Journal of Potato Research

Year:

2014

Language:

english

File:

PDF, 423 KB

english, 2014

20

Soft Rot Disease Severity Is Affected by Potato Physiology and Pectobacterium taxa

Marquez-Villavicencio, Maria del Pilar, Groves, Russell L., Charkowski, Amy O.

Journal:

Year:

2011

Language:

english

File:

PDF, 612 KB

english, 2011

21

Homology and Functional Similarity of an hrp-Linked Pathogenicity Locus, dspEF, of Erwinia amylovora and the Avirulence Locus avrE of Pseudomonas syringae Pathovar Tomato

Adam J. Bogdanove, Jihyun F. Kim, Zhongmin Wei, Peter Kolchinsky, Amy O. Charkowski, Alison K. Conlin, Alan Collmer and Steven V. Beer

Journal:

Proceedings of the National Academy of Sciences

Year:

1998

Language:

english

File:

PDF, 1.64 MB

english, 1998

22

Role of the Hrp Type III Protein Secretion System in Growth of Pseudomonas syringae pv. Syringae B728a on Host Plants in the Field

Susan S. Hirano, Amy O. Charkowski, Alan Collmer, David K. Willis and Christen D. Upper

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 1.23 MB

english, 1999

23

Identification of host-microbe interaction factors in the genomes of soft rot-associated pathogensDickeya dadantii3937 andPectobacterium carotovorumWPP14 with supervised machine learning

Bing Ma,Amy O Charkowski,Jeremy D Glasner,Nicole T Perna

Journal:

Year:

2014

Language:

english

File:

PDF, 746 KB

english, 2014

24

High performance liquid chromatographic separation of insulin, glucagon and somatostatin

Fischer, L. J., Thies, R. L., Charkowski, D.

Journal:

Analytical Chemistry

Year:

1978

Language:

english

File:

PDF, 209 KB

english, 1978

25

The Dickeya dadantii biofilm matrix consists of cellulose nanofibres, and is an emergent property dependent upon the type III secretion system and the cellulose synthesis operon

Jahn, C. E., Selimi, D. A., Barak, J. D., Charkowski, A. O.

Journal:

Microbiology (Society for General Microbiology)

Year:

2011

Language:

english

File:

PDF, 885 KB

english, 2011

26

The Flagellar Sigma Factor FliA Is Required for Dickeya dadantii Virulence

Jahn, Courtney E., Willis, David K., Charkowski, Amy O.

Journal:

Molecular Plant-Microbe Interactions

Year:

2008

Language:

english

File:

PDF, 703 KB

english, 2008

27

Genome Sequence of the Plant-Pathogenic Bacterium Dickeya dadantii 3937

Glasner, J. D., Yang, C.-H., Reverchon, S., Hugouvieux-Cotte-Pattat, N., Condemine, G., Bohin, J.-P., Van Gijsegem, F., Yang, S., Franza, T., Expert, D., Plunkett, G., San Francisco, M. J., Charkowski

Journal:

Journal of Bacteriology

Year:

2011

Language:

english

File:

PDF, 240 KB

english, 2011

28

Population Behavior Analysis of dspE and pelD Regulation in Erwinia chrysanthemi 3937

Peng, Quan, Yang, Shihui, Charkowski, Amy O., Yap, Mee-Ngan, Steeber, Douglas A., Keen, Noel T., Yang, Ching-Hong

Journal:

Molecular Plant-Microbe Interactions

Year:

2006

Language:

english

File:

PDF, 181 KB

english, 2006

29

Application of Marker Assisted Selection forPotato Virus YResistance in the University of Wisconsin Potato Breeding Program

Fulladolsa, Ana C., Navarro, Felix M., Kota, Rajitha, Severson, Kristi, Palta, Jiwan P., Charkowski, Amy O.

Journal:

American Journal of Potato Research

Year:

2015

Language:

english

File:

PDF, 205 KB

english, 2015

30

Salmonella enterica Suppresses Pectobacterium carotovorum subsp. carotovorum Population and Soft Rot Progression by Acidifying the Microaerophilic Environment

Kwan, G., Charkowski, A. O., Barak, J. D.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.09 MB

english, 2013

31

Underexplored Niches in Research on Plant Pathogenic Bacteria

Allen, C., Bent, A., Charkowski, A.

Journal:

PLANT PHYSIOLOGY

Year:

2009

Language:

english

File:

PDF, 332 KB

english, 2009

32

The Response Regulator HrpY of Dickeya dadantii 3937 Regulates Virulence Genes Not Linked to the hrp Cluster

Yap, Mee-Ngan, Yang, Ching-Hong, Charkowski, Amy O.

Journal:

Molecular Plant-Microbe Interactions

Year:

2008

Language:

english

File:

PDF, 497 KB

english, 2008

33

Dynamic Regulation of GacA in Type III Secretion, Pectinase Gene Expression, Pellicle Formation, and Pathogenicity of Dickeya dadantii ( Erwinia chrysanthemi 3937)

Yang, Shihui, Peng, Quan, Zhang, Qiu, Yi, Xuan, Choi, Chang Jae, Reedy, Ralph M., Charkowski, Amy O., Yang, Ching-Hong

Journal:

Molecular Plant-Microbe Interactions

Year:

2008

Language:

english

File:

PDF, 961 KB

english, 2008

34

The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants

Alfano, J. R., Charkowski, A. O., Deng, W.-L., Badel, J. L., Petnicki-Ocwieja, T., van Dijk, K., Collmer, A.

Journal:

Proceedings of the National Academy of Sciences

Year:

2000

Language:

english

File:

PDF, 191 KB

english, 2000

35

Pseudomonas syringae Exchangeable Effector Loci: Sequence Diversity in Representative Pathovars and Virulence Function in P. syringae pv. syringae B728a

Deng, W.-L., Rehm, A. H., Charkowski, A. O., Rojas, C. M., Collmer, A.

Journal:

Journal of Bacteriology

Year:

2003

Language:

english

File:

PDF, 628 KB

english, 2003

36

Role of the Hrp type III protein secretion system in growth of Pseudomonas syringae pv. syringae B728a on host plants in the field

Hirano, S. S., Charkowski, A. O., Collmer, A., Willis, D. K., Upper, C. D.

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 224 KB

english, 1999

37

Harpin Mediates Cell Aggregation in Erwinia chrysanthemi 3937

Yap, M.-N., Rojas, C. M., Yang, C.-H., Charkowski, A. O.

Journal:

Journal of Bacteriology

Year:

2006

Language:

english

File:

PDF, 485 KB

english, 2006

38

Biology and control ofPectobacteriumin potato

Charkowski, Amy O.

Journal:

American Journal of Potato Research

Year:

2015

File:

PDF, 214 KB

2015

39

The Erwinia chrysanthemi Type III Secretion System Is Required for Multicellular Behavior

Yap, M.-N., Yang, C.-H., Barak, J. D., Jahn, C. E., Charkowski, A. O.

Journal:

Journal of Bacteriology

Year:

2005

Language:

english

File:

PDF, 565 KB

english, 2005

40

Low-Cost Potato Tissue Culture with Microwave and Bleach Media Preparation and Sterilization

Weber, Brooke N., Witherell, R. Andrews, Charkowski, Amy O.

Journal:

American Journal of Potato Research

Year:

2015

Language:

english

File:

PDF, 1.08 MB

english, 2015

41

Genomic Diversity of Erwinia carotovora subsp. carotovora and Its Correlation with Virulence

Yap, M.-N., Barak, J. D., Charkowski, A. O.

Journal:

Applied and Environmental Microbiology

Year:

2004

Language:

english

File:

PDF, 665 KB

english, 2004

42

Differences in Attachment of Salmonella enterica Serovars and Escherichia coli O157:H7 to Alfalfa Sprouts

Barak, J. D., Whitehand, L. C., Charkowski, A. O.

Journal:

Applied and Environmental Microbiology

Year:

2002

Language:

english

File:

PDF, 132 KB

english, 2002

43

Pseudomonas syringae Hrp type III secretion system and effector proteins

Collmer, A., Badel, J. L., Charkowski, A. O., Deng, W.-L., Fouts, D. E., Ramos, A. R., Rehm, A. H., Anderson, D. M., Schneewind, O., van Dijk, K., Alfano, J. R.

Journal:

Proceedings of the National Academy of Sciences

Year:

2000

Language:

english

File:

PDF, 248 KB

english, 2000

44

Global Effect of Indole-3-Acetic Acid Biosynthesis on Multiple Virulence Factors of Erwinia chrysanthemi 3937

Yang, S., Zhang, Q., Guo, J., Charkowski, A. O., Glick, B. R., Ibekwe, A. M., Cooksey, D. A., Yang, C.-H.

Journal:

Applied and Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 170 KB

english, 2007

45

The Plant Phenolic Compound p-Coumaric Acid Represses Gene Expression in the Dickeya dadantii Type III Secretion System

Li, Y., Peng, Q., Selimi, D., Wang, Q., Charkowski, A. O., Chen, X., Yang, C.-H.

Journal:

Applied and Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 557 KB

english, 2009

46

Differences in Growth of Salmonella enterica and Escherichia coli O157:H7 on Alfalfa Sprouts

Charkowski, A. O., Barak, J. D., Sarreal, C. Z., Mandrell, R. E.

Journal:

Applied and Environmental Microbiology

Year:

2002

Language:

english

File:

PDF, 1.46 MB

english, 2002

47

Salmonella enterica Virulence Genes Are Required for Bacterial Attachment to Plant Tissue

Barak, J. D., Gorski, L., Naraghi-Arani, P., Charkowski, A. O.

Journal:

Applied and Environmental Microbiology

Year:

2005

Language:

english

File:

PDF, 210 KB

english, 2005

48

Underexplored Niches in Research on Plant Pathogenic Bacteria

Caitilyn Allen, Andrew Bent and Amy Charkowski

Journal:

PLANT PHYSIOLOGY

Year:

2009

Language:

english

File:

PDF, 1.34 MB

english, 2009

49

Seed degeneration in potato: the need for an integrated seed health strategy to mitigate the problem in developing countries

Thomas-Sharma, S., Abdurahman, A., Ali, S., Andrade-Piedra, J. L., Bao, S., Charkowski, A. O., Crook, D., Kadian, M., Kromann, P., Struik, P. C., Torrance, L., Garrett, K. A., Forbes, G. A.

Journal:

Plant Pathology

Year:

2016

Language:

english

File:

PDF, 362 KB

english, 2016

50

A Gene in the Pseudomonas syringae pv. tomato Hrp Pathogenicity Island Conserved Effector Locus, hopPtoA1 , Contributes to Efficient Formation of Bacterial Colonies in Planta and Is Duplicated Elsewhere in the Genome

Badel, J. L., Charkowski, A. O., Deng, W.-L., Collmer, A.

Journal:

Molecular Plant-Microbe Interactions

Year:

2002

Language:

english

File:

PDF, 462 KB

english, 2002

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